Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC21.64■■□□□ 1.05
SHANK2Q9UPX8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 AC073347.1-201ENST00000421633 2643 ntBASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 LYPLA2P1-203ENST00000447689 696 ntBASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 DNM1P51-201ENST00000558149 522 ntBASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 DGAT2L7P-201ENST00000602462 744 ntBASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 MIR6074-201ENST00000612054 107 ntBASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SHANK2Q9UPX8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 TCAF2P1-201ENST00000291129 2421 ntBASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 AL357563.1-201ENST00000404728 395 ntBASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 HIST2H2BA-201ENST00000412169 381 ntBASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHANK2Q9UPX8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 ERP29P1-201ENST00000442902 706 ntBASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 AC018463.1-201ENST00000456674 917 ntBASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 AC140658.4-201ENST00000561990 352 ntBASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 AC107464.3-201ENST00000609172 737 ntBASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 FO393412.1-201ENST00000619841 382 ntBASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHANK2Q9UPX8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 HLA-DMA-203ENST00000395305 777 ntBASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 AC098934.1-203ENST00000442868 1262 ntBASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 RPL18AP8-201ENST00000486071 528 ntBASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 AC007952.4-201ENST00000573866 637 ntBASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 AC138466.4-201ENST00000623965 852 ntBASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 AL132780.4-201ENST00000624870 1135 ntBASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SHANK2Q9UPX8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms