Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 GCSHP3-201ENST00000431120 391 ntBASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 AC124068.2-201ENST00000569473 1109 ntBASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 AC244250.3-201ENST00000620749 366 ntBASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 AC073592.2-201ENST00000623062 780 ntBASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNRF3Q9ULT6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.64■□□□□ 0.42
ZNRF3Q9ULT6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNRF3Q9ULT6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 AC073869.2-201ENST00000417338 1026 ntBASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 RN7SL396P-201ENST00000471086 295 ntBASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 DNM1P51-201ENST00000558149 522 ntBASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 AC011247.3-201ENST00000603297 438 ntBASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ZNRF3Q9ULT6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AC020658.6-201ENST00000623564 1870 ntBASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AC023024.2-201ENST00000623561 1993 ntBASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 ST13P19-201ENST00000442505 1124 ntBASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 RPL18AP8-201ENST00000486071 528 ntBASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AC007952.4-201ENST00000573866 637 ntBASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 WASH3P-207ENST00000560956 1394 ntBASIC17.63■□□□□ 0.41
ZNRF3Q9ULT6 AL136172.1-201ENST00000598590 1394 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms