Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 LINC01165-201ENST00000445190 1623 ntBASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HCFC1R1Q9NWW0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AC026320.2-201ENST00000434379 478 ntBASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AC098935.1-201ENST00000446057 611 ntBASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 RN7SL258P-201ENST00000478664 300 ntBASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 MIR3677-201ENST00000578964 60 ntBASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 MIR6769A-201ENST00000617340 73 ntBASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AC011491.1-203ENST00000637688 543 ntBASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HCFC1R1Q9NWW0 FAM90A2P-201ENST00000511144 1395 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 FAM90A25P-201ENST00000528404 1395 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 KRT18P36-201ENST00000411618 1276 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 AC078991.1-201ENST00000437297 610 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 AC087045.2-201ENST00000606279 1003 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 AC092171.5-201ENST00000608012 942 ntBASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.36■□□□□ 0.05
HCFC1R1Q9NWW0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms