Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 PUDPP3-201ENST00000445368 636 ntBASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 AP001258.2-201ENST00000529891 490 ntBASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 AL118558.3-201ENST00000607414 1079 ntBASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 AC007663.3-201ENST00000609632 465 ntBASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDK5RAP1Q96SZ6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 AC021723.1-201ENST00000486306 515 ntBASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 AC126915.1-201ENST00000522847 1038 ntBASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 KRT8P29-201ENST00000420409 1371 ntBASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 AC091951.1-201ENST00000512854 2465 ntBASIC15.48■□□□□ 0.07
CDK5RAP1Q96SZ6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 MRPL37P1-201ENST00000592451 1337 ntBASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 KRT8P13-201ENST00000463294 1010 ntBASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms