Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.77□□□□□ -0.36
USP9XQ93008 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
USP9XQ93008 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
USP9XQ93008 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.77□□□□□ -0.37
USP9XQ93008 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.77□□□□□ -0.37
USP9XQ93008 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
USP9XQ93008 MIR645-201ENST00000385283 94 ntBASIC12.77□□□□□ -0.37
USP9XQ93008 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC12.77□□□□□ -0.37
USP9XQ93008 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.77□□□□□ -0.37
USP9XQ93008 KRT8P30-201ENST00000432100 650 ntBASIC12.77□□□□□ -0.37
USP9XQ93008 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.77□□□□□ -0.37
USP9XQ93008 GNG10P1-201ENST00000452289 199 ntBASIC12.77□□□□□ -0.37
USP9XQ93008 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
USP9XQ93008 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC12.77□□□□□ -0.37
USP9XQ93008 AC110057.1-201ENST00000636031 898 ntBASIC12.77□□□□□ -0.37
USP9XQ93008 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
USP9XQ93008 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
USP9XQ93008 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
USP9XQ93008 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.77□□□□□ -0.37
USP9XQ93008 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.77□□□□□ -0.37
USP9XQ93008 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.77□□□□□ -0.37
USP9XQ93008 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.77□□□□□ -0.37
USP9XQ93008 LINC00528-201ENST00000600723 2160 ntBASIC12.77□□□□□ -0.37
USP9XQ93008 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
USP9XQ93008 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USP9XQ93008 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
USP9XQ93008 OR10N1P-201ENST00000392758 869 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.76□□□□□ -0.37
USP9XQ93008 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 KRT18P46-201ENST00000435568 1279 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 AC018638.5-201ENST00000450885 754 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 SLC25A15P1-201ENST00000456738 342 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.76□□□□□ -0.37
USP9XQ93008 SLC25A15P3-201ENST00000505530 290 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
USP9XQ93008 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.76□□□□□ -0.37
USP9XQ93008 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 OR8T1P-201ENST00000421347 918 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 KNOP1P1-201ENST00000542108 989 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 AC080013.5-201ENST00000607044 679 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 AL121949.1-201ENST00000402043 968 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 AC092580.1-201ENST00000433998 658 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 GCOM2-201ENST00000509133 1104 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
USP9XQ93008 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.76□□□□□ -0.37
USP9XQ93008 RN7SL665P-201ENST00000578793 300 ntBASIC12.76□□□□□ -0.37
USP9XQ93008 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USP9XQ93008 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC12.76□□□□□ -0.37
USP9XQ93008 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC12.76□□□□□ -0.37
USP9XQ93008 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms