Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 TSPY26P-202ENST00000565928 3884 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AC239868.1-201ENST00000369385 493 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AL138725.1-201ENST00000407347 1314 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AC078991.1-201ENST00000437297 610 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 RN7SL818P-201ENST00000485099 259 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 NPM1P43-201ENST00000558669 786 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AC087045.2-201ENST00000606279 1003 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 RN7SL725P-201ENST00000606439 259 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AC092171.5-201ENST00000608012 942 ntBASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEFF1Q8IYR6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 KRT8P21-201ENST00000430398 1491 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 AC012508.2-201ENST00000567613 1472 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 OR2K2-202ENST00000374428 1038 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 AL355334.1-201ENST00000417713 215 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 RN7SL8P-201ENST00000461771 266 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 AC135983.4-201ENST00000564116 1262 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 AC008825.2-201ENST00000603374 718 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 MIR6720-201ENST00000611664 98 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 Z98259.2-201ENST00000641583 609 ntBASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEFF1Q8IYR6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms