Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 OR8T1P-201ENST00000421347 918 ntBASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 DDX39AP1-201ENST00000445147 1181 ntBASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 AL135901.1-201ENST00000451812 333 ntBASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 LINC01101-201ENST00000622953 1884 ntBASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.81■□□□□ 0.76
KRT28Q7Z3Y7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 COX20P1-201ENST00000366529 357 ntBASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT28Q7Z3Y7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 AC020658.6-201ENST00000623564 1870 ntBASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 AC112693.3-201ENST00000624819 1983 ntBASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 AC092580.1-201ENST00000433998 658 ntBASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 AC226150.1-201ENST00000544259 466 ntBASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms