Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 GPR53P-205ENST00000457298 1084 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 IGHV3-71-201ENST00000523324 359 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 AC009407.1-201ENST00000568958 598 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 AC105021.1-202ENST00000570572 669 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXR1Q6PIV2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 AC009477.1-201ENST00000452936 217 ntBASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 TP53TG3HP-202ENST00000569755 579 ntBASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 MIR6752-201ENST00000618442 71 ntBASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 SBF1P1-201ENST00000444527 5631 ntBASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
FOXR1Q6PIV2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.71■□□□□ 0.1
FOXR1Q6PIV2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
FOXR1Q6PIV2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.71■□□□□ 0.1
FOXR1Q6PIV2 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXR1Q6PIV2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 BEND3P3-201ENST00000611030 2440 ntBASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
FOXR1Q6PIV2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms