Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC013355.1-201ENST00000562625 723 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AL353708.1-201ENST00000567904 1257 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 RN7SL163P-201ENST00000583100 276 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC008507.2-201ENST00000588402 1176 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC008825.2-201ENST00000603374 718 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC006058.4-201ENST00000624016 1670 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC068587.6-202ENST00000641839 5619 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 CYP46A4P-201ENST00000414953 267 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC022217.1-201ENST00000521069 738 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 MIR4706-201ENST00000582134 82 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC005324.6-201ENST00000587972 613 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC132192.2-201ENST00000596206 1147 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 AC005014.3-201ENST00000605985 190 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.84■□□□□ 0.13
VARS2Q5ST30 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VARS2Q5ST30 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
VARS2Q5ST30 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.83■□□□□ 0.13
VARS2Q5ST30 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.83■□□□□ 0.13
VARS2Q5ST30 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.83■□□□□ 0.13
VARS2Q5ST30 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
VARS2Q5ST30 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.83■□□□□ 0.13
VARS2Q5ST30 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VARS2Q5ST30 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.83■□□□□ 0.13
VARS2Q5ST30 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 RPS20P25-201ENST00000412447 352 ntBASIC15.83■□□□□ 0.12
VARS2Q5ST30 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 SPTLC1P5-201ENST00000450718 252 ntBASIC15.83■□□□□ 0.12
VARS2Q5ST30 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VARS2Q5ST30 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.83■□□□□ 0.12
VARS2Q5ST30 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms