Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 TPM3P8-201ENST00000330554 643 ntBASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 RNA5SP486-201ENST00000515961 83 ntBASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 AC012645.4-201ENST00000610691 1061 ntBASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 AC027601.5-201ENST00000624065 2482 ntBASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBWD3Q5JTY5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 C2orf27AP3-201ENST00000434123 579 ntBASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AC078819.1-201ENST00000547454 765 ntBASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AC012085.1-201ENST00000548270 765 ntBASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 KRT90P-201ENST00000549264 1064 ntBASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AL354718.3-201ENST00000616414 581 ntBASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 CR382287.1-201ENST00000623954 586 ntBASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 MRPL37P1-201ENST00000592451 1337 ntBASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 AP000593.2-201ENST00000542775 1433 ntBASIC16.11■□□□□ 0.17
CBWD3Q5JTY5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CBWD3Q5JTY5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBWD3Q5JTY5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBWD3Q5JTY5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBWD3Q5JTY5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms