Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC021723.1-201ENST00000486306 515 ntBASIC14.66□□□□□ -0.06
CDK3Q00526 AC100827.2-201ENST00000563214 1194 ntBASIC14.66□□□□□ -0.06
CDK3Q00526 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.66□□□□□ -0.06
CDK3Q00526 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.66□□□□□ -0.06
CDK3Q00526 MIR3615-201ENST00000581999 87 ntBASIC14.66□□□□□ -0.06
CDK3Q00526 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
CDK3Q00526 AC132192.2-201ENST00000596206 1147 ntBASIC14.66□□□□□ -0.06
CDK3Q00526 AL023803.2-201ENST00000620080 638 ntBASIC14.66□□□□□ -0.06
CDK3Q00526 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.66□□□□□ -0.06
CDK3Q00526 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.66□□□□□ -0.06
CDK3Q00526 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.66□□□□□ -0.06
CDK3Q00526 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.66□□□□□ -0.06
CDK3Q00526 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 AC013726.1-201ENST00000563747 2285 ntBASIC14.66□□□□□ -0.06
CDK3Q00526 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDK3Q00526 AC018442.1-201ENST00000421439 2061 ntBASIC14.65□□□□□ -0.06
CDK3Q00526 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.65□□□□□ -0.06
CDK3Q00526 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.65□□□□□ -0.06
CDK3Q00526 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.65□□□□□ -0.06
CDK3Q00526 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.65□□□□□ -0.06
CDK3Q00526 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CDK3Q00526 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.65□□□□□ -0.06
CDK3Q00526 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CDK3Q00526 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDK3Q00526 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDK3Q00526 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 MRPL37P1-201ENST00000592451 1337 ntBASIC14.65□□□□□ -0.06
CDK3Q00526 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.65□□□□□ -0.06
CDK3Q00526 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDK3Q00526 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CDK3Q00526 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.07
CDK3Q00526 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CDK3Q00526 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDK3Q00526 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.64□□□□□ -0.07
CDK3Q00526 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.64□□□□□ -0.07
CDK3Q00526 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDK3Q00526 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms