Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.36□□□□□ -0.27
GFRA1P56159 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 AC132192.2-201ENST00000596206 1147 ntBASIC13.36□□□□□ -0.27
GFRA1P56159 AC007663.3-201ENST00000609632 465 ntBASIC13.36□□□□□ -0.27
GFRA1P56159 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.36□□□□□ -0.27
GFRA1P56159 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.36□□□□□ -0.27
GFRA1P56159 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GFRA1P56159 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
GFRA1P56159 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
GFRA1P56159 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
GFRA1P56159 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
GFRA1P56159 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.35□□□□□ -0.27
GFRA1P56159 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.35□□□□□ -0.27
GFRA1P56159 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 MIR1247-201ENST00000408206 136 ntBASIC13.35□□□□□ -0.27
GFRA1P56159 GPAA1P2-201ENST00000417923 928 ntBASIC13.35□□□□□ -0.27
GFRA1P56159 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.35□□□□□ -0.27
GFRA1P56159 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.35□□□□□ -0.27
GFRA1P56159 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.35□□□□□ -0.27
GFRA1P56159 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.35□□□□□ -0.27
GFRA1P56159 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.35□□□□□ -0.27
GFRA1P56159 AC126915.1-201ENST00000522847 1038 ntBASIC13.35□□□□□ -0.27
GFRA1P56159 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
GFRA1P56159 AP001258.2-201ENST00000529891 490 ntBASIC13.35□□□□□ -0.27
GFRA1P56159 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
GFRA1P56159 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.35□□□□□ -0.27
GFRA1P56159 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 MIR6787-201ENST00000616675 61 ntBASIC13.35□□□□□ -0.27
GFRA1P56159 AL023803.2-201ENST00000620080 638 ntBASIC13.35□□□□□ -0.27
GFRA1P56159 GPR182-203ENST00000622922 591 ntBASIC13.35□□□□□ -0.27
GFRA1P56159 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
GFRA1P56159 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.35□□□□□ -0.27
GFRA1P56159 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.35□□□□□ -0.27
GFRA1P56159 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 MRPL37P1-201ENST00000592451 1337 ntBASIC13.35□□□□□ -0.27
GFRA1P56159 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GFRA1P56159 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
GFRA1P56159 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 AC013726.1-201ENST00000563747 2285 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 AC092135.3-201ENST00000624151 1846 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 KRT8P29-201ENST00000420409 1371 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GFRA1P56159 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GFRA1P56159 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 FAM58BP-201ENST00000439056 645 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.34□□□□□ -0.27
GFRA1P56159 KRT8P13-201ENST00000463294 1010 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 AC099548.2-209ENST00000480264 625 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.34□□□□□ -0.27
GFRA1P56159 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.34□□□□□ -0.27
GFRA1P56159 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms