Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
SUMO3P55854 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SUMO3P55854 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.51□□□□□ -0.25
SUMO3P55854 AC020910.5-201ENST00000623668 1865 ntBASIC13.51□□□□□ -0.25
SUMO3P55854 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.51□□□□□ -0.25
SUMO3P55854 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SUMO3P55854 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 MIR1909-201ENST00000411312 80 ntBASIC13.51□□□□□ -0.25
SUMO3P55854 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.51□□□□□ -0.25
SUMO3P55854 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.51□□□□□ -0.25
SUMO3P55854 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SUMO3P55854 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.51□□□□□ -0.25
SUMO3P55854 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.51□□□□□ -0.25
SUMO3P55854 AP001002.3-201ENST00000623482 206 ntBASIC13.51□□□□□ -0.25
SUMO3P55854 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
SUMO3P55854 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.51□□□□□ -0.25
SUMO3P55854 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.51□□□□□ -0.25
SUMO3P55854 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.51□□□□□ -0.25
SUMO3P55854 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.51□□□□□ -0.25
SUMO3P55854 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SUMO3P55854 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 AGGF1P1-201ENST00000509500 2073 ntBASIC13.51□□□□□ -0.25
SUMO3P55854 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
SUMO3P55854 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SUMO3P55854 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 INE2-201ENST00000630399 1874 ntBASIC13.5□□□□□ -0.25
SUMO3P55854 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.5□□□□□ -0.25
SUMO3P55854 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.5□□□□□ -0.25
SUMO3P55854 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 CNN2P10-201ENST00000443067 918 ntBASIC13.5□□□□□ -0.25
SUMO3P55854 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.5□□□□□ -0.25
SUMO3P55854 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.5□□□□□ -0.25
SUMO3P55854 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.5□□□□□ -0.25
SUMO3P55854 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SUMO3P55854 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.5□□□□□ -0.25
SUMO3P55854 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SUMO3P55854 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 AC239800.4-201ENST00000603712 296 ntBASIC13.5□□□□□ -0.25
SUMO3P55854 AC017083.2-201ENST00000608069 979 ntBASIC13.5□□□□□ -0.25
SUMO3P55854 MIR6805-201ENST00000615055 62 ntBASIC13.5□□□□□ -0.25
SUMO3P55854 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SUMO3P55854 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SUMO3P55854 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SUMO3P55854 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms