Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TDH-203ENST00000531764 1110 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 SNX29P1-201ENST00000548357 1007 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.12■□□□□ 0.01
LIMK2P53671 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.12■□□□□ 0.01
LIMK2P53671 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.12■□□□□ 0.01
LIMK2P53671 AC124283.3-201ENST00000570869 594 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.12■□□□□ 0.01
LIMK2P53671 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.12■□□□□ 0.01
LIMK2P53671 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 AC136759.1-202ENST00000530858 2194 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LIMK2P53671 AL138799.1-201ENST00000448213 1675 ntBASIC15.12■□□□□ 0.01
LIMK2P53671 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.12■□□□□ 0.01
LIMK2P53671 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIMK2P53671 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LIMK2P53671 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
LIMK2P53671 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
LIMK2P53671 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.11■□□□□ 0.01
LIMK2P53671 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.11■□□□□ 0.01
LIMK2P53671 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LIMK2P53671 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.11■□□□□ 0.01
LIMK2P53671 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.11■□□□□ 0.01
LIMK2P53671 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.11■□□□□ 0.01
LIMK2P53671 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.11■□□□□ 0.01
LIMK2P53671 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.11■□□□□ 0.01
LIMK2P53671 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.11■□□□□ 0.01
LIMK2P53671 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
LIMK2P53671 AL049840.4-201ENST00000602422 811 ntBASIC15.11■□□□□ 0.01
LIMK2P53671 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LIMK2P53671 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
LIMK2P53671 AL354702.1-201ENST00000442006 1960 ntBASIC15.11■□□□□ 0.01
LIMK2P53671 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LIMK2P53671 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.11■□□□□ 0.01
LIMK2P53671 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LIMK2P53671 AC152010.1-201ENST00000415779 2006 ntBASIC15.1■□□□□ 0.01
LIMK2P53671 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LIMK2P53671 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LIMK2P53671 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LIMK2P53671 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LIMK2P53671 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LIMK2P53671 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.1■□□□□ 0.01
LIMK2P53671 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 AC006504.5-208ENST00000588784 2401 ntBASIC15.1■□□□□ 0.01
LIMK2P53671 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.1■□□□□ 0.01
LIMK2P53671 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.1■□□□□ 0.01
LIMK2P53671 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LIMK2P53671 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.1■□□□□ 0.01
LIMK2P53671 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.1■□□□□ 0.01
LIMK2P53671 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms