Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
PDX1P52945 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PDX1P52945 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.54□□□□□ -0.08
PDX1P52945 AL354877.1-201ENST00000424412 413 ntBASIC14.54□□□□□ -0.08
PDX1P52945 HLA-K-203ENST00000430151 1046 ntBASIC14.54□□□□□ -0.08
PDX1P52945 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.54□□□□□ -0.08
PDX1P52945 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.54□□□□□ -0.08
PDX1P52945 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.54□□□□□ -0.08
PDX1P52945 IMP3P2-201ENST00000489760 475 ntBASIC14.54□□□□□ -0.08
PDX1P52945 AC100850.1-201ENST00000506768 649 ntBASIC14.54□□□□□ -0.08
PDX1P52945 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.54□□□□□ -0.08
PDX1P52945 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.54□□□□□ -0.08
PDX1P52945 AC097724.1-201ENST00000609581 426 ntBASIC14.54□□□□□ -0.08
PDX1P52945 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.54□□□□□ -0.08
PDX1P52945 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.54□□□□□ -0.08
PDX1P52945 AC091812.3-201ENST00000621362 345 ntBASIC14.54□□□□□ -0.08
PDX1P52945 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.54□□□□□ -0.08
PDX1P52945 AC126365.1-201ENST00000578585 1514 ntBASIC14.54□□□□□ -0.08
PDX1P52945 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.54□□□□□ -0.08
PDX1P52945 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.54□□□□□ -0.08
PDX1P52945 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.54□□□□□ -0.08
PDX1P52945 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PDX1P52945 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDX1P52945 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 TCAF2P1-201ENST00000291129 2421 ntBASIC14.53□□□□□ -0.08
PDX1P52945 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDX1P52945 AC023024.2-201ENST00000623561 1993 ntBASIC14.53□□□□□ -0.08
PDX1P52945 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PDX1P52945 AC055811.4-201ENST00000624039 1754 ntBASIC14.53□□□□□ -0.08
PDX1P52945 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.53□□□□□ -0.08
PDX1P52945 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 CLUHP2-201ENST00000426660 1303 ntBASIC14.53□□□□□ -0.08
PDX1P52945 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.53□□□□□ -0.08
PDX1P52945 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.53□□□□□ -0.08
PDX1P52945 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.53□□□□□ -0.08
PDX1P52945 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.53□□□□□ -0.08
PDX1P52945 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.53□□□□□ -0.08
PDX1P52945 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 AP001505.2-201ENST00000616815 443 ntBASIC14.53□□□□□ -0.08
PDX1P52945 AC022748.3-201ENST00000621828 275 ntBASIC14.53□□□□□ -0.08
PDX1P52945 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.53□□□□□ -0.08
PDX1P52945 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.53□□□□□ -0.08
PDX1P52945 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.53□□□□□ -0.08
PDX1P52945 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.53□□□□□ -0.08
PDX1P52945 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDX1P52945 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PDX1P52945 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PDX1P52945 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
PDX1P52945 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.52□□□□□ -0.08
PDX1P52945 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDX1P52945 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDX1P52945 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.52□□□□□ -0.08
PDX1P52945 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.52□□□□□ -0.08
PDX1P52945 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PDX1P52945 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms