Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 AC068418.2-201ENST00000577309 3703 ntBASIC13.99□□□□□ -0.17
EFNA3P52797 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.99□□□□□ -0.17
EFNA3P52797 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.99□□□□□ -0.17
EFNA3P52797 AC104306.2-201ENST00000451877 341 ntBASIC13.99□□□□□ -0.17
EFNA3P52797 AC099548.2-209ENST00000480264 625 ntBASIC13.99□□□□□ -0.17
EFNA3P52797 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNA3P52797 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNA3P52797 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.99□□□□□ -0.17
EFNA3P52797 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNA3P52797 AC104982.3-201ENST00000581995 514 ntBASIC13.99□□□□□ -0.17
EFNA3P52797 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 AL008638.5-201ENST00000623814 1298 ntBASIC13.99□□□□□ -0.17
EFNA3P52797 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNA3P52797 AC002472.3-201ENST00000640124 621 ntBASIC13.99□□□□□ -0.17
EFNA3P52797 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNA3P52797 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 DBET-201ENST00000630918 3363 ntBASIC13.99□□□□□ -0.17
EFNA3P52797 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
EFNA3P52797 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.99□□□□□ -0.17
EFNA3P52797 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.99□□□□□ -0.17
EFNA3P52797 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.98□□□□□ -0.17
EFNA3P52797 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.98□□□□□ -0.17
EFNA3P52797 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.98□□□□□ -0.17
EFNA3P52797 AC079178.1-201ENST00000420915 656 ntBASIC13.98□□□□□ -0.17
EFNA3P52797 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
EFNA3P52797 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.98□□□□□ -0.17
EFNA3P52797 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.98□□□□□ -0.17
EFNA3P52797 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
EFNA3P52797 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
EFNA3P52797 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
EFNA3P52797 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.98□□□□□ -0.17
EFNA3P52797 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
EFNA3P52797 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.97□□□□□ -0.17
EFNA3P52797 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms