Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL022334.2-201ENST00000610000 484 ntBASIC18.2■□□□□ 0.5
PDE6BP35913 AC138466.5-201ENST00000624002 808 ntBASIC18.2■□□□□ 0.5
PDE6BP35913 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE6BP35913 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6BP35913 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6BP35913 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 LINC01815-202ENST00000641468 1409 ntBASIC18.2■□□□□ 0.5
PDE6BP35913 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6BP35913 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.2■□□□□ 0.5
PDE6BP35913 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE6BP35913 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6BP35913 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE6BP35913 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
PDE6BP35913 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDE6BP35913 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 LINC02199-201ENST00000506655 2702 ntBASIC18.2■□□□□ 0.5
PDE6BP35913 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.2■□□□□ 0.5
PDE6BP35913 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.2■□□□□ 0.5
PDE6BP35913 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.2■□□□□ 0.5
PDE6BP35913 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDE6BP35913 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.2■□□□□ 0.5
PDE6BP35913 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDE6BP35913 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 REXO1L2P-201ENST00000425429 2069 ntBASIC18.19■□□□□ 0.5
PDE6BP35913 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDE6BP35913 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6BP35913 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6BP35913 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.19■□□□□ 0.5
PDE6BP35913 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6BP35913 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDE6BP35913 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6BP35913 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PDE6BP35913 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE6BP35913 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE6BP35913 CR383656.3-201ENST00000551315 183 ntBASIC18.19■□□□□ 0.5
PDE6BP35913 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.19■□□□□ 0.5
PDE6BP35913 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.19■□□□□ 0.5
PDE6BP35913 AL022344.2-201ENST00000568976 968 ntBASIC18.19■□□□□ 0.5
PDE6BP35913 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE6BP35913 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE6BP35913 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6BP35913 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.19■□□□□ 0.5
PDE6BP35913 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDE6BP35913 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PDE6BP35913 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.19■□□□□ 0.5
PDE6BP35913 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDE6BP35913 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDE6BP35913 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDE6BP35913 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PDE6BP35913 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE6BP35913 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE6BP35913 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDE6BP35913 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.18■□□□□ 0.5
PDE6BP35913 AL357563.1-201ENST00000404728 395 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6BP35913 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 BCAS2P2-201ENST00000425064 674 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 AL139008.1-201ENST00000437894 228 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.18■□□□□ 0.5
PDE6BP35913 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.18■□□□□ 0.5
PDE6BP35913 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC18.18■□□□□ 0.5
PDE6BP35913 MIR5196-201ENST00000578146 115 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.18■□□□□ 0.5
PDE6BP35913 LINC00431-202ENST00000636375 159 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDE6BP35913 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.18■□□□□ 0.5
PDE6BP35913 AC092850.2-201ENST00000623821 2697 ntBASIC18.18■□□□□ 0.5
PDE6BP35913 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDE6BP35913 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms