Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 AC018529.2-202ENST00000611482 3087 ntBASIC14.32□□□□□ -0.12
GPC1P35052 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 AC007541.1-201ENST00000570282 1469 ntBASIC14.31□□□□□ -0.12
GPC1P35052 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GPC1P35052 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 C1QBPP1-201ENST00000400117 770 ntBASIC14.31□□□□□ -0.12
GPC1P35052 DFFBP1-201ENST00000433250 979 ntBASIC14.31□□□□□ -0.12
GPC1P35052 TSPY16P-201ENST00000449843 468 ntBASIC14.31□□□□□ -0.12
GPC1P35052 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.31□□□□□ -0.12
GPC1P35052 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.31□□□□□ -0.12
GPC1P35052 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.31□□□□□ -0.12
GPC1P35052 SERBP1P5-201ENST00000510079 1181 ntBASIC14.31□□□□□ -0.12
GPC1P35052 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.31□□□□□ -0.12
GPC1P35052 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.31□□□□□ -0.12
GPC1P35052 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.31□□□□□ -0.12
GPC1P35052 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 AC120045.2-201ENST00000567334 178 ntBASIC14.31□□□□□ -0.12
GPC1P35052 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 BRI3BPP1-201ENST00000594224 787 ntBASIC14.31□□□□□ -0.12
GPC1P35052 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.31□□□□□ -0.12
GPC1P35052 AL132655.2-201ENST00000596276 594 ntBASIC14.31□□□□□ -0.12
GPC1P35052 AC099568.2-201ENST00000609194 695 ntBASIC14.31□□□□□ -0.12
GPC1P35052 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 AL662799.1-202ENST00000614205 422 ntBASIC14.31□□□□□ -0.12
GPC1P35052 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GPC1P35052 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GPC1P35052 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.31□□□□□ -0.12
GPC1P35052 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.3□□□□□ -0.12
GPC1P35052 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GPC1P35052 AC092053.3-201ENST00000641308 4975 ntBASIC14.3□□□□□ -0.12
GPC1P35052 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
GPC1P35052 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GPC1P35052 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms