Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A2P16615 AC021723.1-201ENST00000486306 515 ntBASIC16.6■□□□□ 0.25
ATP2A2P16615 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A2P16615 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A2P16615 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A2P16615 AP001002.3-201ENST00000623482 206 ntBASIC16.6■□□□□ 0.25
ATP2A2P16615 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A2P16615 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A2P16615 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A2P16615 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A2P16615 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A2P16615 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A2P16615 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ATP2A2P16615 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A2P16615 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A2P16615 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATP2A2P16615 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A2P16615 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ATP2A2P16615 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A2P16615 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A2P16615 SBF1P1-201ENST00000444527 5631 ntBASIC16.59■□□□□ 0.25
ATP2A2P16615 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A2P16615 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A2P16615 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A2P16615 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 AL139094.1-201ENST00000405549 1188 ntBASIC16.59■□□□□ 0.25
ATP2A2P16615 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATP2A2P16615 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A2P16615 AL596276.2-201ENST00000447525 331 ntBASIC16.59■□□□□ 0.25
ATP2A2P16615 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A2P16615 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A2P16615 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A2P16615 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A2P16615 AC073413.1-201ENST00000603927 732 ntBASIC16.59■□□□□ 0.25
ATP2A2P16615 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A2P16615 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP2A2P16615 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A2P16615 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A2P16615 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A2P16615 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A2P16615 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A2P16615 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A2P16615 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A2P16615 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A2P16615 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A2P16615 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A2P16615 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
ATP2A2P16615 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A2P16615 ACTG1P2-201ENST00000415776 1125 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP2A2P16615 AL354877.1-201ENST00000424412 413 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 ACTG1P11-201ENST00000425411 1125 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 AC069218.1-201ENST00000435269 762 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 HIST2H2BB-201ENST00000449108 381 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 AC012618.1-201ENST00000461223 412 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP2A2P16615 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.58■□□□□ 0.24
ATP2A2P16615 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A2P16615 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP2A2P16615 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.58■□□□□ 0.24
ATP2A2P16615 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP2A2P16615 MIR4750-201ENST00000584564 56 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 AC025181.2-201ENST00000606994 802 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 AL023803.2-201ENST00000620080 638 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 KRT8P29-201ENST00000420409 1371 ntBASIC16.58■□□□□ 0.24
ATP2A2P16615 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A2P16615 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A2P16615 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A2P16615 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATP2A2P16615 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A2P16615 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
ATP2A2P16615 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms