Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CGB3P0DN86 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CGB3P0DN86 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CGB3P0DN86 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 AC004945.1-201ENST00000416738 983 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.24□□□□□ -0.45
CGB3P0DN86 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.24□□□□□ -0.45
CGB3P0DN86 C2orf27AP3-201ENST00000434123 579 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.24□□□□□ -0.45
CGB3P0DN86 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.24□□□□□ -0.45
CGB3P0DN86 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.24□□□□□ -0.45
CGB3P0DN86 COX20P2-201ENST00000452636 358 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 AC007551.1-201ENST00000457394 519 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.24□□□□□ -0.45
CGB3P0DN86 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.24□□□□□ -0.45
CGB3P0DN86 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.24□□□□□ -0.45
CGB3P0DN86 ECM1P1-201ENST00000604092 1279 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.24□□□□□ -0.45
CGB3P0DN86 MIR6074-201ENST00000612054 107 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 AC244669.2-201ENST00000612320 853 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 AL354718.3-201ENST00000616414 581 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.24□□□□□ -0.45
CGB3P0DN86 AC009093.2-202ENST00000620513 2079 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 CR382287.1-201ENST00000623954 586 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 AC006453.4-201ENST00000636949 1252 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 AC068418.2-201ENST00000577309 3703 ntBASIC12.24□□□□□ -0.45
CGB3P0DN86 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CGB3P0DN86 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CGB3P0DN86 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.24□□□□□ -0.45
CGB3P0DN86 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.24□□□□□ -0.45
CGB3P0DN86 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 AC139712.1-201ENST00000378256 1875 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 AC090505.1-201ENST00000430515 1834 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 AL590440.2-201ENST00000641973 1595 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CGB3P0DN86 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.23□□□□□ -0.45
CGB3P0DN86 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 AL035633.1-201ENST00000406139 838 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 ARSEP1-201ENST00000420443 635 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 FAM197Y7-201ENST00000432892 766 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 FAM8A4P-201ENST00000435433 1213 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CGB3P0DN86 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.23□□□□□ -0.45
CGB3P0DN86 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.23□□□□□ -0.45
CGB3P0DN86 AC078819.1-201ENST00000547454 765 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 AC012085.1-201ENST00000548270 765 ntBASIC12.23□□□□□ -0.45
CGB3P0DN86 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.23□□□□□ -0.45
CGB3P0DN86 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CGB3P0DN86 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.23□□□□□ -0.45
CGB3P0DN86 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.23□□□□□ -0.45
CGB3P0DN86 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms