Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.39□□□□□ -0.27
CNOT4O95628 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 TPM3P8-201ENST00000330554 643 ntBASIC13.38□□□□□ -0.27
CNOT4O95628 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.38□□□□□ -0.27
CNOT4O95628 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.38□□□□□ -0.27
CNOT4O95628 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.38□□□□□ -0.27
CNOT4O95628 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.38□□□□□ -0.27
CNOT4O95628 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.38□□□□□ -0.27
CNOT4O95628 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.38□□□□□ -0.27
CNOT4O95628 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.38□□□□□ -0.27
CNOT4O95628 AC023310.1-201ENST00000554836 735 ntBASIC13.38□□□□□ -0.27
CNOT4O95628 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CNOT4O95628 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 AC244093.1-201ENST00000610837 814 ntBASIC13.38□□□□□ -0.27
CNOT4O95628 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 ENPP7P14-201ENST00000621765 1040 ntBASIC13.38□□□□□ -0.27
CNOT4O95628 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 AC023157.3-201ENST00000619086 2088 ntBASIC13.38□□□□□ -0.27
CNOT4O95628 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.38□□□□□ -0.27
CNOT4O95628 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.38□□□□□ -0.27
CNOT4O95628 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNOT4O95628 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.37□□□□□ -0.27
CNOT4O95628 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.37□□□□□ -0.27
CNOT4O95628 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CNOT4O95628 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.37□□□□□ -0.27
CNOT4O95628 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.37□□□□□ -0.27
CNOT4O95628 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.37□□□□□ -0.27
CNOT4O95628 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.37□□□□□ -0.27
CNOT4O95628 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.37□□□□□ -0.27
CNOT4O95628 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.37□□□□□ -0.27
CNOT4O95628 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.37□□□□□ -0.27
CNOT4O95628 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.37□□□□□ -0.27
CNOT4O95628 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 AC006453.4-201ENST00000636949 1252 ntBASIC13.37□□□□□ -0.27
CNOT4O95628 AC008687.7-202ENST00000637404 953 ntBASIC13.37□□□□□ -0.27
CNOT4O95628 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 AC136621.1-201ENST00000624017 2304 ntBASIC13.37□□□□□ -0.27
CNOT4O95628 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.37□□□□□ -0.27
CNOT4O95628 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms