Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.1■□□□□ 0.17
CSPG5O95196 AC090857.1-201ENST00000527400 390 ntBASIC16.1■□□□□ 0.17
CSPG5O95196 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.1■□□□□ 0.17
CSPG5O95196 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.1■□□□□ 0.17
CSPG5O95196 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 AL157791.1-201ENST00000553667 1699 ntBASIC16.1■□□□□ 0.17
CSPG5O95196 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CSPG5O95196 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 AC020910.5-201ENST00000623668 1865 ntBASIC16.1■□□□□ 0.17
CSPG5O95196 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.09■□□□□ 0.17
CSPG5O95196 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 CICP11-201ENST00000434745 2827 ntBASIC16.09■□□□□ 0.17
CSPG5O95196 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.09■□□□□ 0.17
CSPG5O95196 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.09■□□□□ 0.17
CSPG5O95196 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CSPG5O95196 AL136309.1-201ENST00000403917 691 ntBASIC16.09■□□□□ 0.17
CSPG5O95196 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.09■□□□□ 0.17
CSPG5O95196 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CSPG5O95196 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.09■□□□□ 0.17
CSPG5O95196 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.09■□□□□ 0.17
CSPG5O95196 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CSPG5O95196 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.09■□□□□ 0.17
CSPG5O95196 RN7SL163P-201ENST00000583100 276 ntBASIC16.09■□□□□ 0.17
CSPG5O95196 AC020922.3-201ENST00000595064 547 ntBASIC16.09■□□□□ 0.17
CSPG5O95196 BNIP3P13-201ENST00000599968 566 ntBASIC16.09■□□□□ 0.17
CSPG5O95196 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.09■□□□□ 0.17
CSPG5O95196 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.09■□□□□ 0.17
CSPG5O95196 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.09■□□□□ 0.17
CSPG5O95196 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.09■□□□□ 0.17
CSPG5O95196 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.09■□□□□ 0.17
CSPG5O95196 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.09■□□□□ 0.17
CSPG5O95196 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CSPG5O95196 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CSPG5O95196 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
CSPG5O95196 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CSPG5O95196 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CSPG5O95196 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSPG5O95196 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSPG5O95196 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.08■□□□□ 0.17
CSPG5O95196 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSPG5O95196 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CSPG5O95196 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CSPG5O95196 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.08■□□□□ 0.16
CSPG5O95196 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CSPG5O95196 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CSPG5O95196 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CSPG5O95196 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.08■□□□□ 0.16
CSPG5O95196 AC026434.2-201ENST00000506094 1078 ntBASIC16.08■□□□□ 0.16
CSPG5O95196 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.08■□□□□ 0.16
CSPG5O95196 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CSPG5O95196 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.08■□□□□ 0.16
CSPG5O95196 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.08■□□□□ 0.16
CSPG5O95196 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CSPG5O95196 AL023803.2-201ENST00000620080 638 ntBASIC16.08■□□□□ 0.16
CSPG5O95196 AC007718.1-201ENST00000621078 280 ntBASIC16.08■□□□□ 0.16
CSPG5O95196 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms