Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LDB3O75112 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 AC020910.5-201ENST00000623668 1865 ntBASIC14.1□□□□□ -0.15
LDB3O75112 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.1□□□□□ -0.15
LDB3O75112 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.1□□□□□ -0.15
LDB3O75112 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LDB3O75112 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.1□□□□□ -0.15
LDB3O75112 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.1□□□□□ -0.15
LDB3O75112 AC007969.1-201ENST00000433675 447 ntBASIC14.1□□□□□ -0.15
LDB3O75112 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LDB3O75112 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.1□□□□□ -0.15
LDB3O75112 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.1□□□□□ -0.15
LDB3O75112 RPL7P3-201ENST00000441388 714 ntBASIC14.1□□□□□ -0.15
LDB3O75112 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.1□□□□□ -0.15
LDB3O75112 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.1□□□□□ -0.15
LDB3O75112 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.1□□□□□ -0.15
LDB3O75112 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.1□□□□□ -0.15
LDB3O75112 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.1□□□□□ -0.15
LDB3O75112 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LDB3O75112 MIR6775-201ENST00000617557 69 ntBASIC14.1□□□□□ -0.15
LDB3O75112 AC138466.3-201ENST00000619983 221 ntBASIC14.1□□□□□ -0.15
LDB3O75112 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.1□□□□□ -0.15
LDB3O75112 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.1□□□□□ -0.15
LDB3O75112 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LDB3O75112 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LDB3O75112 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LDB3O75112 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.1□□□□□ -0.15
LDB3O75112 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 AC097376.2-205ENST00000610159 5334 ntBASIC14.09□□□□□ -0.15
LDB3O75112 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
LDB3O75112 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.09□□□□□ -0.15
LDB3O75112 ARSEP1-201ENST00000420443 635 ntBASIC14.09□□□□□ -0.15
LDB3O75112 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 MESTP3-201ENST00000503460 968 ntBASIC14.09□□□□□ -0.15
LDB3O75112 FTLP10-202ENST00000505798 471 ntBASIC14.09□□□□□ -0.15
LDB3O75112 AL391280.1-201ENST00000506969 1062 ntBASIC14.09□□□□□ -0.15
LDB3O75112 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 AC104989.1-201ENST00000519711 778 ntBASIC14.09□□□□□ -0.15
LDB3O75112 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.09□□□□□ -0.15
LDB3O75112 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 AC006453.4-201ENST00000636949 1252 ntBASIC14.09□□□□□ -0.15
LDB3O75112 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 AC003102.2-201ENST00000589195 1469 ntBASIC14.09□□□□□ -0.15
LDB3O75112 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 FKBP4P6-201ENST00000457486 1332 ntBASIC14.09□□□□□ -0.15
LDB3O75112 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LDB3O75112 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LDB3O75112 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LDB3O75112 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
LDB3O75112 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LDB3O75112 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms