Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.06■□□□□ 0
TRIM49D1C9J1S8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TRIM49D1C9J1S8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.05■□□□□ -0
TRIM49D1C9J1S8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 KLF2P3-201ENST00000451977 1087 ntBASIC15.05■□□□□ -0
TRIM49D1C9J1S8 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.05■□□□□ -0
TRIM49D1C9J1S8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 SNHG9-202ENST00000564014 471 ntBASIC15.05■□□□□ -0
TRIM49D1C9J1S8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 AC107373.2-201ENST00000607735 490 ntBASIC15.05■□□□□ -0
TRIM49D1C9J1S8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 AL138799.1-201ENST00000448213 1675 ntBASIC15.05■□□□□ -0
TRIM49D1C9J1S8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRIM49D1C9J1S8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC090505.1-201ENST00000430515 1834 ntBASIC15.04■□□□□ -0
TRIM49D1C9J1S8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 TSEN15P1-201ENST00000423257 515 ntBASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC092580.3-201ENST00000430932 139 ntBASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AL589987.1-201ENST00000453380 819 ntBASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC140878.1-201ENST00000565277 250 ntBASIC15.04■□□□□ -0
TRIM49D1C9J1S8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM49D1C9J1S8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM49D1C9J1S8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms