Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 AC140479.7-201ENST00000636301 2332 ntBASIC12.55□□□□□ -0.4
SRRM5B3KS81 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 RN7SKP175-201ENST00000408472 289 ntBASIC12.55□□□□□ -0.4
SRRM5B3KS81 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 BNIP3P42-201ENST00000454982 569 ntBASIC12.55□□□□□ -0.4
SRRM5B3KS81 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 ALG3P1-201ENST00000508806 1114 ntBASIC12.55□□□□□ -0.4
SRRM5B3KS81 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 BNIP3P29-201ENST00000598302 571 ntBASIC12.55□□□□□ -0.4
SRRM5B3KS81 AC011447.5-201ENST00000616168 564 ntBASIC12.55□□□□□ -0.4
SRRM5B3KS81 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 AC007686.3-201ENST00000619017 3487 ntBASIC12.55□□□□□ -0.4
SRRM5B3KS81 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
SRRM5B3KS81 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM5B3KS81 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 AL354702.1-201ENST00000442006 1960 ntBASIC12.54□□□□□ -0.4
SRRM5B3KS81 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 AC022494.1-201ENST00000466044 728 ntBASIC12.54□□□□□ -0.4
SRRM5B3KS81 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM5B3KS81 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 AC079316.1-201ENST00000548397 411 ntBASIC12.54□□□□□ -0.4
SRRM5B3KS81 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.54□□□□□ -0.4
SRRM5B3KS81 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms