Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HACD3Q9P035 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.22■□□□□ 0.03
HACD3Q9P035 AJ011931.1-201ENST00000618749 2492 ntBASIC15.22■□□□□ 0.03
HACD3Q9P035 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HACD3Q9P035 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HACD3Q9P035 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HACD3Q9P035 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HACD3Q9P035 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HACD3Q9P035 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
HACD3Q9P035 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HACD3Q9P035 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HACD3Q9P035 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.22■□□□□ 0.03
HACD3Q9P035 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 AC134312.5-201ENST00000568031 1313 ntBASIC15.21■□□□□ 0.03
HACD3Q9P035 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HACD3Q9P035 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 AL512384.1-201ENST00000406683 331 ntBASIC15.21■□□□□ 0.03
HACD3Q9P035 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
HACD3Q9P035 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HACD3Q9P035 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.21■□□□□ 0.03
HACD3Q9P035 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 COX20P2-201ENST00000452636 358 ntBASIC15.21■□□□□ 0.03
HACD3Q9P035 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.21■□□□□ 0.03
HACD3Q9P035 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.21■□□□□ 0.03
HACD3Q9P035 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HACD3Q9P035 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
HACD3Q9P035 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.21■□□□□ 0.02
HACD3Q9P035 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HACD3Q9P035 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.21■□□□□ 0.02
HACD3Q9P035 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.21■□□□□ 0.02
HACD3Q9P035 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
HACD3Q9P035 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HACD3Q9P035 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
HACD3Q9P035 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HACD3Q9P035 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HACD3Q9P035 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
HACD3Q9P035 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HACD3Q9P035 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
HACD3Q9P035 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HACD3Q9P035 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.2■□□□□ 0.02
HACD3Q9P035 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
HACD3Q9P035 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
HACD3Q9P035 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 LINC00552-201ENST00000625151 2579 ntBASIC15.2■□□□□ 0.02
HACD3Q9P035 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HACD3Q9P035 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.2■□□□□ 0.02
HACD3Q9P035 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.2■□□□□ 0.02
HACD3Q9P035 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HACD3Q9P035 AL035633.1-201ENST00000406139 838 ntBASIC15.2■□□□□ 0.02
HACD3Q9P035 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.2■□□□□ 0.02
HACD3Q9P035 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 AL355864.2-201ENST00000447420 863 ntBASIC15.2■□□□□ 0.02
HACD3Q9P035 INE1-201ENST00000456273 945 ntBASIC15.2■□□□□ 0.02
HACD3Q9P035 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.2■□□□□ 0.02
HACD3Q9P035 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HACD3Q9P035 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.2■□□□□ 0.02
HACD3Q9P035 RPSAP52-203ENST00000622976 1023 ntBASIC15.2■□□□□ 0.02
HACD3Q9P035 AC105233.6-201ENST00000642093 218 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms