Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRC3Q9BY71 AC063926.3-201ENST00000624734 5658 ntBASIC15.56■□□□□ 0.08
LRRC3Q9BY71 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRRC3Q9BY71 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 NORAD-201ENST00000565493 5339 ntBASIC15.55■□□□□ 0.08
LRRC3Q9BY71 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 AC023157.3-201ENST00000619086 2088 ntBASIC15.55■□□□□ 0.08
LRRC3Q9BY71 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 AC091046.1-201ENST00000331871 207 ntBASIC15.55■□□□□ 0.08
LRRC3Q9BY71 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC3Q9BY71 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 FAM90A7P-201ENST00000382628 1395 ntBASIC15.54■□□□□ 0.08
LRRC3Q9BY71 FAM90A23P-201ENST00000400136 1395 ntBASIC15.54■□□□□ 0.08
LRRC3Q9BY71 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AL133466.1-201ENST00000447582 150 ntBASIC15.54■□□□□ 0.08
LRRC3Q9BY71 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AL161670.2-201ENST00000557650 1227 ntBASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 AL132994.2-201ENST00000603120 687 ntBASIC15.54■□□□□ 0.08
LRRC3Q9BY71 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3Q9BY71 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 TNRC18P2-201ENST00000417666 2714 ntBASIC15.53■□□□□ 0.08
LRRC3Q9BY71 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
LRRC3Q9BY71 MBLAC2-202ENST00000514906 1936 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms