Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 ANKRD19P-201ENST00000338192 862 ntBASIC15.51■□□□□ 0.07
HAPLN3Q96S86 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 RN7SKP230-201ENST00000365642 335 ntBASIC15.51■□□□□ 0.07
HAPLN3Q96S86 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 SNX29P1-201ENST00000548357 1007 ntBASIC15.51■□□□□ 0.07
HAPLN3Q96S86 AP005482.1-201ENST00000563722 1273 ntBASIC15.51■□□□□ 0.07
HAPLN3Q96S86 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 AC017083.2-201ENST00000608069 979 ntBASIC15.51■□□□□ 0.07
HAPLN3Q96S86 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 MIR6775-201ENST00000617557 69 ntBASIC15.51■□□□□ 0.07
HAPLN3Q96S86 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.51■□□□□ 0.07
HAPLN3Q96S86 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HAPLN3Q96S86 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 CICP23-201ENST00000605013 2741 ntBASIC15.5■□□□□ 0.07
HAPLN3Q96S86 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC008687.7-202ENST00000637404 953 ntBASIC15.5■□□□□ 0.07
HAPLN3Q96S86 AC079781.5-202ENST00000641784 3743 ntBASIC15.5■□□□□ 0.07
HAPLN3Q96S86 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.5■□□□□ 0.07
HAPLN3Q96S86 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 AL354989.2-201ENST00000435838 1540 ntBASIC15.49■□□□□ 0.07
HAPLN3Q96S86 AC011840.2-201ENST00000563063 1520 ntBASIC15.49■□□□□ 0.07
HAPLN3Q96S86 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HAPLN3Q96S86 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms