Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC85AQ96PX6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 AC012618.1-201ENST00000461223 412 ntBASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 RN7SL574P-201ENST00000581512 297 ntBASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 AC005324.6-201ENST00000587972 613 ntBASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 AC106872.11-201ENST00000605838 421 ntBASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 CU633904.3-201ENST00000624042 1029 ntBASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC85AQ96PX6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AC011742.3-201ENST00000439053 820 ntBASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 NUP210P1-202ENST00000504322 710 ntBASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 AC091812.3-201ENST00000621362 345 ntBASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 WASH3P-207ENST00000560956 1394 ntBASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC85AQ96PX6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms