Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSAQ969W0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 RNU1-114P-201ENST00000365297 166 ntBASIC13.17□□□□□ -0.3
SPTSSAQ969W0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 PIN1P1-201ENST00000412108 996 ntBASIC13.17□□□□□ -0.3
SPTSSAQ969W0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 GIMAP3P-201ENST00000495150 836 ntBASIC13.17□□□□□ -0.3
SPTSSAQ969W0 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.17□□□□□ -0.3
SPTSSAQ969W0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 DUX4L47-201ENST00000566374 394 ntBASIC13.17□□□□□ -0.3
SPTSSAQ969W0 AP001063.1-201ENST00000568332 529 ntBASIC13.17□□□□□ -0.3
SPTSSAQ969W0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 AC055811.4-201ENST00000624039 1754 ntBASIC13.17□□□□□ -0.3
SPTSSAQ969W0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSAQ969W0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 DMBT1P1-203ENST00000636837 4628 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AL031595.1-201ENST00000623969 4709 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 ACKR1-201ENST00000368121 1240 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 BCRP1-201ENST00000444246 691 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 SPCS2P1-201ENST00000561636 679 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.16□□□□□ -0.3
SPTSSAQ969W0 AC140912.1-201ENST00000577171 1054 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 CHCHD2P3-201ENST00000603038 451 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 CU634019.7-201ENST00000624153 1185 ntBASIC13.16□□□□□ -0.3
SPTSSAQ969W0 FP236241.2-201ENST00000624906 1185 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms