Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AC016700.1-201ENST00000429424 312 ntBASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AC021723.1-201ENST00000486306 515 ntBASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 RNA5SP423-201ENST00000517127 109 ntBASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AC002472.3-201ENST00000640124 621 ntBASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AC104640.1-201ENST00000562617 2109 ntBASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP6V0A1Q93050 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 AC020910.5-201ENST00000623668 1865 ntBASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP6V0A1Q93050 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ATP6V0A1Q93050 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ATP6V0A1Q93050 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 MIR4683-201ENST00000579659 81 ntBASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP6V0A1Q93050 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms