Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AL645939.5-201ENST00000606834 243 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 AC090164.2-201ENST00000611487 516 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 AC139712.1-201ENST00000378256 1875 ntBASIC17.31■□□□□ 0.36
NEDD1Q8NHV4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 MARK2P5-201ENST00000507649 634 ntBASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD1Q8NHV4 FAM90A7P-201ENST00000382628 1395 ntBASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 FAM90A23P-201ENST00000400136 1395 ntBASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 KRT8P28-201ENST00000433288 1390 ntBASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 BCYRN1-201ENST00000418539 200 ntBASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 AC005077.2-201ENST00000449786 690 ntBASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 SCARNA21-201ENST00000517026 139 ntBASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 NDUFV2P1-201ENST00000596415 907 ntBASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD1Q8NHV4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms