Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ARHGEF39Q8N4T4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
ARHGEF39Q8N4T4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ARHGEF39Q8N4T4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ARHGEF39Q8N4T4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ARHGEF39Q8N4T4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ARHGEF39Q8N4T4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.07□□□□□ -0.16
ARHGEF39Q8N4T4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ZNF767P-206ENST00000513792 565 ntBASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 DUX4L46-201ENST00000566845 751 ntBASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 AC132192.2-201ENST00000596206 1147 ntBASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 AL162426.1-201ENST00000624141 743 ntBASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 MRPL37P1-201ENST00000592451 1337 ntBASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 E2F3P2-201ENST00000447755 1422 ntBASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 CICP24-201ENST00000605464 2705 ntBASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.06□□□□□ -0.16
ARHGEF39Q8N4T4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 POM121L10P-201ENST00000436994 1285 ntBASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 AC005730.2-201ENST00000564549 1184 ntBASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 AC091271.1-201ENST00000611877 1162 ntBASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 AC092135.3-201ENST00000624151 1846 ntBASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ARHGEF39Q8N4T4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms