Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 AC090616.6-203ENST00000579186 1945 ntBASIC18.39■□□□□ 0.53
COL23A1Q86Y22 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 PYY2-201ENST00000315776 282 ntBASIC18.38■□□□□ 0.53
COL23A1Q86Y22 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 BRI3P1-201ENST00000440440 378 ntBASIC18.38■□□□□ 0.53
COL23A1Q86Y22 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 AC083801.1-201ENST00000491689 358 ntBASIC18.38■□□□□ 0.53
COL23A1Q86Y22 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 RN7SL665P-201ENST00000578793 300 ntBASIC18.38■□□□□ 0.53
COL23A1Q86Y22 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 AC006483.2-201ENST00000609813 515 ntBASIC18.38■□□□□ 0.53
COL23A1Q86Y22 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 TEKT4P2-202ENST00000559466 1312 ntBASIC18.38■□□□□ 0.53
COL23A1Q86Y22 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL23A1Q86Y22 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 HLA-DPA2-205ENST00000433582 733 ntBASIC18.37■□□□□ 0.53
COL23A1Q86Y22 ST13P19-201ENST00000442505 1124 ntBASIC18.37■□□□□ 0.53
COL23A1Q86Y22 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 RBM4-207ENST00000506523 654 ntTSL 3 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 SIGLEC22P-201ENST00000599104 714 ntBASIC18.37■□□□□ 0.53
COL23A1Q86Y22 AC010976.2-201ENST00000609697 852 ntBASIC18.37■□□□□ 0.53
COL23A1Q86Y22 MIR6816-201ENST00000620368 66 ntBASIC18.37■□□□□ 0.53
COL23A1Q86Y22 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 AL590440.2-201ENST00000641973 1595 ntBASIC18.37■□□□□ 0.53
COL23A1Q86Y22 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COL23A1Q86Y22 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 OR51A9P-201ENST00000422578 911 ntBASIC18.36■□□□□ 0.53
COL23A1Q86Y22 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.36■□□□□ 0.53
COL23A1Q86Y22 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms