Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SEC61A1P61619 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SEC61A1P61619 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SEC61A1P61619 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.23□□□□□ -0.29
SEC61A1P61619 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.23□□□□□ -0.29
SEC61A1P61619 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.23□□□□□ -0.29
SEC61A1P61619 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
SEC61A1P61619 EEF1DP4-201ENST00000446006 880 ntBASIC13.23□□□□□ -0.29
SEC61A1P61619 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.23□□□□□ -0.29
SEC61A1P61619 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.23□□□□□ -0.29
SEC61A1P61619 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 API5-211ENST00000534695 560 ntTSL 5 BASIC13.23□□□□□ -0.29
SEC61A1P61619 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
SEC61A1P61619 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
SEC61A1P61619 AL450472.2-201ENST00000603663 1156 ntBASIC13.23□□□□□ -0.29
SEC61A1P61619 LINC01115-203ENST00000606068 577 ntBASIC13.23□□□□□ -0.29
SEC61A1P61619 AC074044.1-201ENST00000609673 707 ntBASIC13.23□□□□□ -0.29
SEC61A1P61619 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SEC61A1P61619 AC025048.6-201ENST00000634326 1161 ntBASIC13.23□□□□□ -0.29
SEC61A1P61619 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.23□□□□□ -0.29
SEC61A1P61619 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SEC61A1P61619 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SEC61A1P61619 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.23□□□□□ -0.29
SEC61A1P61619 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.22□□□□□ -0.29
SEC61A1P61619 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SEC61A1P61619 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SEC61A1P61619 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.22□□□□□ -0.29
SEC61A1P61619 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.22□□□□□ -0.29
SEC61A1P61619 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SEC61A1P61619 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.22□□□□□ -0.29
SEC61A1P61619 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.22□□□□□ -0.29
SEC61A1P61619 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.22□□□□□ -0.29
SEC61A1P61619 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SEC61A1P61619 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.22□□□□□ -0.29
SEC61A1P61619 AC023310.3-201ENST00000557027 670 ntBASIC13.22□□□□□ -0.29
SEC61A1P61619 AC100756.1-201ENST00000562736 682 ntBASIC13.22□□□□□ -0.29
SEC61A1P61619 AC138749.3-201ENST00000567691 622 ntBASIC13.22□□□□□ -0.29
SEC61A1P61619 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.22□□□□□ -0.29
SEC61A1P61619 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms