Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 COX11-210ENST00000639671 696 ntBASIC11.16□□□□□ -0.62
CMC4P56277 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.16□□□□□ -0.62
CMC4P56277 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
CMC4P56277 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 MST1L-201ENST00000442552 2185 ntBASIC11.16□□□□□ -0.62
CMC4P56277 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.16□□□□□ -0.62
CMC4P56277 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CMC4P56277 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
CMC4P56277 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.15□□□□□ -0.62
CMC4P56277 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.15□□□□□ -0.62
CMC4P56277 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.15□□□□□ -0.62
CMC4P56277 AL138725.1-201ENST00000407347 1314 ntBASIC11.15□□□□□ -0.62
CMC4P56277 CLUHP2-201ENST00000426660 1303 ntBASIC11.15□□□□□ -0.62
CMC4P56277 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
CMC4P56277 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.15□□□□□ -0.62
CMC4P56277 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.15□□□□□ -0.62
CMC4P56277 MIR1202-201ENST00000408529 83 ntBASIC11.15□□□□□ -0.62
CMC4P56277 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.15□□□□□ -0.62
CMC4P56277 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.15□□□□□ -0.62
CMC4P56277 AC022210.1-201ENST00000449856 793 ntBASIC11.15□□□□□ -0.62
CMC4P56277 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.15□□□□□ -0.62
CMC4P56277 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.15□□□□□ -0.62
CMC4P56277 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.15□□□□□ -0.62
CMC4P56277 RNA5SP412-201ENST00000516234 123 ntBASIC11.15□□□□□ -0.62
CMC4P56277 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.15□□□□□ -0.62
CMC4P56277 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.15□□□□□ -0.62
CMC4P56277 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 BX088702.1-201ENST00000610784 235 ntBASIC11.15□□□□□ -0.62
CMC4P56277 AC244669.2-201ENST00000612320 853 ntBASIC11.15□□□□□ -0.62
CMC4P56277 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.15□□□□□ -0.62
CMC4P56277 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.15□□□□□ -0.62
CMC4P56277 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CMC4P56277 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
CMC4P56277 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.15□□□□□ -0.62
CMC4P56277 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.15□□□□□ -0.62
CMC4P56277 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.15□□□□□ -0.62
CMC4P56277 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CMC4P56277 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.15□□□□□ -0.63
CMC4P56277 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.15□□□□□ -0.63
CMC4P56277 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.15□□□□□ -0.63
CMC4P56277 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CMC4P56277 AC013268.4-201ENST00000637413 2228 ntBASIC11.15□□□□□ -0.63
CMC4P56277 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CMC4P56277 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.15□□□□□ -0.63
CMC4P56277 LINC01101-201ENST00000622953 1884 ntBASIC11.15□□□□□ -0.63
CMC4P56277 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CMC4P56277 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms