Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 AC009093.2-202ENST00000620513 2079 ntBASIC14.4□□□□□ -0.1
EPHA4P54764 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
EPHA4P54764 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.4□□□□□ -0.1
EPHA4P54764 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.4□□□□□ -0.1
EPHA4P54764 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.4□□□□□ -0.1
EPHA4P54764 AC100827.2-201ENST00000563214 1194 ntBASIC14.4□□□□□ -0.1
EPHA4P54764 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.4□□□□□ -0.1
EPHA4P54764 AL451050.2-201ENST00000606967 682 ntBASIC14.4□□□□□ -0.1
EPHA4P54764 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.4□□□□□ -0.1
EPHA4P54764 AC022748.3-201ENST00000621828 275 ntBASIC14.4□□□□□ -0.1
EPHA4P54764 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 AC023090.2-201ENST00000625182 2110 ntBASIC14.4□□□□□ -0.1
EPHA4P54764 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.4□□□□□ -0.1
EPHA4P54764 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
EPHA4P54764 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
EPHA4P54764 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
EPHA4P54764 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
EPHA4P54764 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA4P54764 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 REXO1L2P-201ENST00000425429 2069 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
EPHA4P54764 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 FNTAP2-201ENST00000430308 634 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 EIF4HP1-201ENST00000453115 687 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 AC005740.2-201ENST00000511085 419 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 AC044849.1-201ENST00000519737 1188 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.39□□□□□ -0.11
EPHA4P54764 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.39□□□□□ -0.11
EPHA4P54764 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
EPHA4P54764 BNIP3P13-201ENST00000599968 566 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 BX088702.1-201ENST00000610784 235 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.39□□□□□ -0.11
EPHA4P54764 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.39□□□□□ -0.11
EPHA4P54764 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 AC020910.5-201ENST00000623668 1865 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.39□□□□□ -0.11
EPHA4P54764 SALL4P5-201ENST00000419001 1760 ntBASIC14.39□□□□□ -0.11
EPHA4P54764 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EPHA4P54764 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms