Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.86■□□□□ 0.29
USP11P51784 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.86■□□□□ 0.29
USP11P51784 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.86■□□□□ 0.29
USP11P51784 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.86■□□□□ 0.29
USP11P51784 AL136301.1-201ENST00000615830 422 ntBASIC16.86■□□□□ 0.29
USP11P51784 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 SHC1P1-201ENST00000425230 1745 ntBASIC16.86■□□□□ 0.29
USP11P51784 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 AL136172.1-201ENST00000598590 1394 ntBASIC16.86■□□□□ 0.29
USP11P51784 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
USP11P51784 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
USP11P51784 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
USP11P51784 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
USP11P51784 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
USP11P51784 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.85■□□□□ 0.29
USP11P51784 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.85■□□□□ 0.29
USP11P51784 RPSAP36-202ENST00000494591 1261 ntBASIC16.85■□□□□ 0.29
USP11P51784 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
USP11P51784 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 FAM86HP-204ENST00000513466 959 ntBASIC16.85■□□□□ 0.29
USP11P51784 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.85■□□□□ 0.29
USP11P51784 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
USP11P51784 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
USP11P51784 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP11P51784 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.85■□□□□ 0.29
USP11P51784 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 MTHFR-210ENST00000641407 2387 ntBASIC16.84■□□□□ 0.29
USP11P51784 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 BTBD6P1-201ENST00000412176 1267 ntBASIC16.84■□□□□ 0.29
USP11P51784 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.84■□□□□ 0.29
USP11P51784 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.84■□□□□ 0.29
USP11P51784 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms