Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
LMO1P25800 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO1P25800 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.6□□□□□ -0.39
LMO1P25800 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO1P25800 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.6□□□□□ -0.39
LMO1P25800 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 AC026434.2-201ENST00000506094 1078 ntBASIC12.6□□□□□ -0.39
LMO1P25800 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.6□□□□□ -0.39
LMO1P25800 TP53TG3HP-202ENST00000569755 579 ntBASIC12.6□□□□□ -0.39
LMO1P25800 AC009486.1-201ENST00000569860 813 ntBASIC12.6□□□□□ -0.39
LMO1P25800 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.6□□□□□ -0.39
LMO1P25800 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
LMO1P25800 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
LMO1P25800 AC008494.3-201ENST00000606615 944 ntBASIC12.6□□□□□ -0.39
LMO1P25800 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.6□□□□□ -0.39
LMO1P25800 WFDC1-204ENST00000613603 549 ntBASIC12.6□□□□□ -0.39
LMO1P25800 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
LMO1P25800 AC105233.6-201ENST00000642093 218 ntBASIC12.6□□□□□ -0.39
LMO1P25800 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 LRRC59-203ENST00000576448 1531 ntBASIC12.6□□□□□ -0.39
LMO1P25800 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LMO1P25800 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LMO1P25800 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
LMO1P25800 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LMO1P25800 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LMO1P25800 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 AC093433.1-201ENST00000458048 571 ntBASIC12.59□□□□□ -0.39
LMO1P25800 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.59□□□□□ -0.39
LMO1P25800 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.59□□□□□ -0.39
LMO1P25800 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.59□□□□□ -0.39
LMO1P25800 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.59□□□□□ -0.39
LMO1P25800 CU634019.7-201ENST00000624153 1185 ntBASIC12.59□□□□□ -0.39
LMO1P25800 FP236241.2-201ENST00000624906 1185 ntBASIC12.59□□□□□ -0.39
LMO1P25800 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.59□□□□□ -0.39
LMO1P25800 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.59□□□□□ -0.39
LMO1P25800 AL033527.5-201ENST00000641382 801 ntBASIC12.59□□□□□ -0.39
LMO1P25800 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
LMO1P25800 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LMO1P25800 AC097359.2-201ENST00000604992 2389 ntBASIC12.59□□□□□ -0.39
LMO1P25800 AC099521.3-201ENST00000624251 2938 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms