Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
VCANP13611 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 SAP18P2-201ENST00000434334 459 ntBASIC15.06■□□□□ 0
VCANP13611 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.06■□□□□ 0
VCANP13611 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.06■□□□□ 0
VCANP13611 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.06■□□□□ 0
VCANP13611 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC15.06■□□□□ 0
VCANP13611 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.06■□□□□ 0
VCANP13611 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 AC007250.1-201ENST00000608934 338 ntBASIC15.06■□□□□ 0
VCANP13611 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
VCANP13611 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC15.06■□□□□ 0
VCANP13611 AC084364.1-201ENST00000551967 1556 ntBASIC15.06■□□□□ 0
VCANP13611 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.06■□□□□ 0
VCANP13611 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC15.06■□□□□ 0
VCANP13611 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.06■□□□□ 0
VCANP13611 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
VCANP13611 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 AL954722.1-201ENST00000431238 259 ntBASIC15.06■□□□□ 0
VCANP13611 TREX1-203ENST00000456089 629 ntTSL 3 BASIC15.06■□□□□ 0
VCANP13611 ABCC6P1-203ENST00000565566 1170 ntBASIC15.06■□□□□ 0
VCANP13611 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC15.06■□□□□ 0
VCANP13611 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
VCANP13611 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.06■□□□□ 0
VCANP13611 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.06■□□□□ 0
VCANP13611 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.06■□□□□ 0
VCANP13611 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VCANP13611 IFNWP2-201ENST00000431203 580 ntBASIC15.05■□□□□ 0
VCANP13611 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC15.05■□□□□ 0
VCANP13611 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC15.05■□□□□ 0
VCANP13611 AC025186.1-201ENST00000478174 870 ntBASIC15.05■□□□□ 0
VCANP13611 RNA5SP406-201ENST00000516106 112 ntBASIC15.05■□□□□ 0
VCANP13611 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC15.05■□□□□ 0
VCANP13611 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VCANP13611 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC15.05■□□□□ 0
VCANP13611 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.05■□□□□ 0
VCANP13611 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
VCANP13611 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ 0
VCANP13611 AC008825.2-201ENST00000603374 718 ntBASIC15.05■□□□□ 0
VCANP13611 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.05■□□□□ 0
VCANP13611 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VCANP13611 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VCANP13611 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VCANP13611 AC092850.2-201ENST00000623821 2697 ntBASIC15.05■□□□□ 0
VCANP13611 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC15.05■□□□□ -0
VCANP13611 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC15.05■□□□□ -0
VCANP13611 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.05■□□□□ -0
VCANP13611 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.05■□□□□ -0
VCANP13611 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.05■□□□□ -0
VCANP13611 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC15.05■□□□□ -0
VCANP13611 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.05■□□□□ -0
VCANP13611 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.05■□□□□ -0
VCANP13611 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VCANP13611 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VCANP13611 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VCANP13611 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.05■□□□□ -0
VCANP13611 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.05■□□□□ -0
VCANP13611 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC15.05■□□□□ -0
VCANP13611 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.05■□□□□ -0
VCANP13611 MED15P3-201ENST00000413613 326 ntBASIC15.05■□□□□ -0
VCANP13611 RPL18AP8-201ENST00000486071 528 ntBASIC15.05■□□□□ -0
VCANP13611 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VCANP13611 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
VCANP13611 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.05■□□□□ -0
VCANP13611 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 HLA-K-203ENST00000430151 1046 ntBASIC15.04■□□□□ -0
VCANP13611 TPT1P11-201ENST00000458482 498 ntBASIC15.04■□□□□ -0
VCANP13611 AC147876.1-201ENST00000504408 322 ntBASIC15.04■□□□□ -0
VCANP13611 ALG3P1-201ENST00000508806 1114 ntBASIC15.04■□□□□ -0
VCANP13611 MST1L-204ENST00000545160 559 ntTSL 4 BASIC15.04■□□□□ -0
VCANP13611 BOLA3P2-201ENST00000586496 323 ntBASIC15.04■□□□□ -0
VCANP13611 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.04■□□□□ -0
VCANP13611 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.04■□□□□ -0
VCANP13611 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.04■□□□□ -0
VCANP13611 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VCANP13611 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.04■□□□□ -0
VCANP13611 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.04■□□□□ -0
VCANP13611 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VCANP13611 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.04■□□□□ -0
VCANP13611 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.04■□□□□ -0
VCANP13611 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms