Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM3P0C091 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM3P0C091 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
FREM3P0C091 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 AL008638.5-201ENST00000623814 1298 ntBASIC13.6□□□□□ -0.23
FREM3P0C091 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
FREM3P0C091 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.59□□□□□ -0.23
FREM3P0C091 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.59□□□□□ -0.23
FREM3P0C091 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.59□□□□□ -0.23
FREM3P0C091 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.59□□□□□ -0.23
FREM3P0C091 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.59□□□□□ -0.23
FREM3P0C091 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
FREM3P0C091 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 AL023775.1-201ENST00000454907 1746 ntBASIC13.59□□□□□ -0.23
FREM3P0C091 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 AL009178.2-201ENST00000597278 2719 ntBASIC13.59□□□□□ -0.23
FREM3P0C091 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.59□□□□□ -0.23
FREM3P0C091 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
FREM3P0C091 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FREM3P0C091 AL008718.2-201ENST00000609206 1313 ntBASIC13.59□□□□□ -0.23
FREM3P0C091 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.58□□□□□ -0.23
FREM3P0C091 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.58□□□□□ -0.23
FREM3P0C091 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
FREM3P0C091 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.58□□□□□ -0.23
FREM3P0C091 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.58□□□□□ -0.23
FREM3P0C091 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
FREM3P0C091 PFN1P12-201ENST00000455938 534 ntBASIC13.58□□□□□ -0.23
FREM3P0C091 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.58□□□□□ -0.23
FREM3P0C091 MIR4525-201ENST00000580000 75 ntBASIC13.58□□□□□ -0.23
FREM3P0C091 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
FREM3P0C091 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
FREM3P0C091 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.58□□□□□ -0.23
FREM3P0C091 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.58□□□□□ -0.24
FREM3P0C091 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 AC232323.1-201ENST00000540724 2099 ntBASIC13.58□□□□□ -0.24
FREM3P0C091 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
FREM3P0C091 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FREM3P0C091 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
FREM3P0C091 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms