Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
EXTL3O43909 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
EXTL3O43909 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 AL136309.1-201ENST00000403917 691 ntBASIC16.22■□□□□ 0.19
EXTL3O43909 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.22■□□□□ 0.19
EXTL3O43909 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.22■□□□□ 0.19
EXTL3O43909 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 BX088702.1-201ENST00000610784 235 ntBASIC16.22■□□□□ 0.19
EXTL3O43909 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
EXTL3O43909 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
EXTL3O43909 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.22■□□□□ 0.19
EXTL3O43909 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.22■□□□□ 0.19
EXTL3O43909 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
EXTL3O43909 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.22■□□□□ 0.19
EXTL3O43909 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
EXTL3O43909 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EXTL3O43909 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.21■□□□□ 0.19
EXTL3O43909 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
EXTL3O43909 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.21■□□□□ 0.19
EXTL3O43909 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
EXTL3O43909 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
EXTL3O43909 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.21■□□□□ 0.19
EXTL3O43909 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.21■□□□□ 0.19
EXTL3O43909 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.21■□□□□ 0.19
EXTL3O43909 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
EXTL3O43909 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.21■□□□□ 0.19
EXTL3O43909 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.21■□□□□ 0.19
EXTL3O43909 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 HOMER2P2-201ENST00000451621 847 ntBASIC16.21■□□□□ 0.19
EXTL3O43909 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.21■□□□□ 0.19
EXTL3O43909 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 ALG3P1-201ENST00000508806 1114 ntBASIC16.21■□□□□ 0.19
EXTL3O43909 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.21■□□□□ 0.19
EXTL3O43909 MIR4683-201ENST00000579659 81 ntBASIC16.21■□□□□ 0.19
EXTL3O43909 PPY2P-201ENST00000582808 702 ntBASIC16.21■□□□□ 0.19
EXTL3O43909 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.21■□□□□ 0.19
EXTL3O43909 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.21■□□□□ 0.19
EXTL3O43909 GPR182-203ENST00000622922 591 ntBASIC16.21■□□□□ 0.19
EXTL3O43909 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
EXTL3O43909 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.21■□□□□ 0.19
EXTL3O43909 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 AL136172.1-201ENST00000598590 1394 ntBASIC16.21■□□□□ 0.19
EXTL3O43909 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
EXTL3O43909 KRT8P4-201ENST00000509735 1454 ntBASIC16.21■□□□□ 0.19
EXTL3O43909 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EXTL3O43909 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.21■□□□□ 0.18
EXTL3O43909 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
EXTL3O43909 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.21■□□□□ 0.18
EXTL3O43909 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.2■□□□□ 0.18
EXTL3O43909 MRPL37P1-201ENST00000592451 1337 ntBASIC16.2■□□□□ 0.18
EXTL3O43909 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
EXTL3O43909 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EXTL3O43909 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EXTL3O43909 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EXTL3O43909 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.2■□□□□ 0.18
EXTL3O43909 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
EXTL3O43909 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
EXTL3O43909 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EXTL3O43909 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.2■□□□□ 0.18
EXTL3O43909 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EXTL3O43909 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EXTL3O43909 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms