Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXN1O15353 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.83■□□□□ 0.45
FOXN1O15353 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN1O15353 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN1O15353 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN1O15353 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN1O15353 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN1O15353 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
FOXN1O15353 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXN1O15353 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN1O15353 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXN1O15353 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.83■□□□□ 0.44
FOXN1O15353 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXN1O15353 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXN1O15353 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXN1O15353 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
FOXN1O15353 RPL17P45-201ENST00000586289 509 ntBASIC17.83■□□□□ 0.44
FOXN1O15353 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXN1O15353 AC097359.3-201ENST00000603982 1210 ntBASIC17.83■□□□□ 0.44
FOXN1O15353 ZACNP1-201ENST00000612259 710 ntBASIC17.83■□□□□ 0.44
FOXN1O15353 AC068587.8-201ENST00000641239 219 ntBASIC17.83■□□□□ 0.44
FOXN1O15353 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
FOXN1O15353 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXN1O15353 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXN1O15353 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
FOXN1O15353 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
FOXN1O15353 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXN1O15353 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXN1O15353 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXN1O15353 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXN1O15353 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXN1O15353 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN1O15353 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN1O15353 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 MST1L-201ENST00000442552 2185 ntBASIC17.82■□□□□ 0.44
FOXN1O15353 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FOXN1O15353 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
FOXN1O15353 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 KLF2P2-201ENST00000416807 1039 ntBASIC17.82■□□□□ 0.44
FOXN1O15353 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN1O15353 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 AL450472.2-201ENST00000603663 1156 ntBASIC17.82■□□□□ 0.44
FOXN1O15353 MIR6816-201ENST00000620368 66 ntBASIC17.82■□□□□ 0.44
FOXN1O15353 ENPP7P14-201ENST00000621765 1040 ntBASIC17.82■□□□□ 0.44
FOXN1O15353 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN1O15353 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
FOXN1O15353 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXN1O15353 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXN1O15353 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FOXN1O15353 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXN1O15353 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.82■□□□□ 0.44
FOXN1O15353 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXN1O15353 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 AL138799.1-201ENST00000448213 1675 ntBASIC17.81■□□□□ 0.44
FOXN1O15353 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXN1O15353 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXN1O15353 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXN1O15353 RNU1-114P-201ENST00000365297 166 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms