Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 MTX1P1-201ENST00000440904 838 ntBASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 AC104306.2-201ENST00000451877 341 ntBASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 AC022616.1-201ENST00000518688 554 ntBASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 AC103810.3-201ENST00000583567 96 ntBASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 AL022328.3-201ENST00000607943 679 ntBASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 AC091951.1-201ENST00000512854 2465 ntBASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA2E9PIF3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 REXO1L4P-201ENST00000605109 1937 ntBASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AC104457.1-201ENST00000401024 814 ntBASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 BCYRN1-201ENST00000418539 200 ntBASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AC007969.1-201ENST00000433675 447 ntBASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 FAM8A4P-201ENST00000435433 1213 ntBASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AP006547.1-201ENST00000563435 692 ntBASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 MIR3615-201ENST00000581999 87 ntBASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA2E9PIF3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms