Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 AC092135.3-201ENST00000624151 1846 ntBASIC16.78■□□□□ 0.28
COL20A1Q9P218 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 AL136295.7-201ENST00000619226 1200 ntBASIC16.78■□□□□ 0.28
COL20A1Q9P218 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL20A1Q9P218 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.78■□□□□ 0.28
COL20A1Q9P218 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.78■□□□□ 0.28
COL20A1Q9P218 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 KRT8P28-201ENST00000433288 1390 ntBASIC16.77■□□□□ 0.28
COL20A1Q9P218 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.77■□□□□ 0.28
COL20A1Q9P218 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 RCC2P8-201ENST00000502779 1035 ntBASIC16.77■□□□□ 0.28
COL20A1Q9P218 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.77■□□□□ 0.28
COL20A1Q9P218 AC009884.2-201ENST00000603110 324 ntBASIC16.77■□□□□ 0.28
COL20A1Q9P218 AC106872.11-201ENST00000605838 421 ntBASIC16.77■□□□□ 0.28
COL20A1Q9P218 AC100757.4-201ENST00000626934 759 ntBASIC16.77■□□□□ 0.28
COL20A1Q9P218 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL20A1Q9P218 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL20A1Q9P218 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
COL20A1Q9P218 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
COL20A1Q9P218 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL20A1Q9P218 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL20A1Q9P218 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL20A1Q9P218 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.77■□□□□ 0.27
COL20A1Q9P218 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 RN7SKP214-201ENST00000364208 315 ntBASIC16.76■□□□□ 0.27
COL20A1Q9P218 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.76■□□□□ 0.27
COL20A1Q9P218 AL596276.2-201ENST00000447525 331 ntBASIC16.76■□□□□ 0.27
COL20A1Q9P218 AL035414.1-201ENST00000451327 857 ntBASIC16.76■□□□□ 0.27
COL20A1Q9P218 UPF3AP2-201ENST00000457924 1132 ntBASIC16.76■□□□□ 0.27
COL20A1Q9P218 AC012618.1-201ENST00000461223 412 ntBASIC16.76■□□□□ 0.27
COL20A1Q9P218 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms