Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 BX640514.1-201ENST00000583223 1918 ntBASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 DUX4L47-201ENST00000566374 394 ntBASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 AC124283.3-201ENST00000570869 594 ntBASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 KRT8P22-201ENST00000562317 1415 ntBASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NEUROD4Q9HD90 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NEUROD4Q9HD90 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms