Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AP001002.3-201ENST00000623482 206 ntBASIC15.02■□□□□ -0
TM9SF3Q9HD45 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.02■□□□□ -0
TM9SF3Q9HD45 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 AC055811.4-201ENST00000624039 1754 ntBASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF3Q9HD45 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 AC016700.1-201ENST00000429424 312 ntBASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 CHMP1AP1-201ENST00000445563 662 ntBASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 AC105129.2-201ENST00000559536 390 ntBASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 AC079328.1-201ENST00000560358 952 ntBASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 AC005730.2-201ENST00000564549 1184 ntBASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 AC138627.1-207ENST00000641560 1006 ntBASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF3Q9HD45 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 AC092127.1-201ENST00000567093 3455 ntBASIC15□□□□□ -0.01
TM9SF3Q9HD45 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 CICP24-201ENST00000605464 2705 ntBASIC15□□□□□ -0.01
TM9SF3Q9HD45 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 UPF3AP2-201ENST00000457924 1132 ntBASIC15□□□□□ -0.01
TM9SF3Q9HD45 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 COG4-212ENST00000564653 590 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 MIR3619-201ENST00000579667 83 ntBASIC15□□□□□ -0.01
TM9SF3Q9HD45 RN7SL190P-201ENST00000582519 257 ntBASIC15□□□□□ -0.01
TM9SF3Q9HD45 AC138466.3-201ENST00000619983 221 ntBASIC15□□□□□ -0.01
TM9SF3Q9HD45 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF3Q9HD45 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TM9SF3Q9HD45 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms