Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL844908.2-201ENST00000609461 460 ntBASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AC012645.4-201ENST00000610691 1061 ntBASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AC007326.2-201ENST00000624224 7579 ntBASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AL157414.3-201ENST00000624276 1954 ntBASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AL360270.3-201ENST00000609118 1348 ntBASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 OR2I1P-209ENST00000641730 5365 ntBASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AMBRA1Q9C0C7 AC130686.1-201ENST00000622936 2466 ntBASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 PPT1-213ENST00000641319 2388 ntBASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 AC009477.1-201ENST00000452936 217 ntBASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 RN7SL618P-201ENST00000477850 296 ntBASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AMBRA1Q9C0C7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AMBRA1Q9C0C7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.08□□□□□ -0.15
AMBRA1Q9C0C7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AMBRA1Q9C0C7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AMBRA1Q9C0C7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
AMBRA1Q9C0C7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 SDHAP3-202ENST00000515467 728 ntBASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms