Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 AC105250.1-201ENST00000509378 2057 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 AC136604.1-201ENST00000418535 575 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 AC134915.1-201ENST00000426461 574 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 RPL13AP25-201ENST00000484130 612 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.37□□□□□ -0.27
VRK1Q99986 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.37□□□□□ -0.27
VRK1Q99986 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.37□□□□□ -0.27
VRK1Q99986 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.37□□□□□ -0.27
VRK1Q99986 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 AC010319.3-201ENST00000597028 470 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 CU634019.7-201ENST00000624153 1185 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 FP236241.2-201ENST00000624906 1185 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
VRK1Q99986 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 TOMM22P5-201ENST00000416399 439 ntBASIC13.36□□□□□ -0.27
VRK1Q99986 ARSEP1-201ENST00000420443 635 ntBASIC13.36□□□□□ -0.27
VRK1Q99986 AL442647.2-201ENST00000429864 857 ntBASIC13.36□□□□□ -0.27
VRK1Q99986 AL162726.2-201ENST00000438986 1017 ntBASIC13.36□□□□□ -0.27
VRK1Q99986 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.36□□□□□ -0.27
VRK1Q99986 AC234783.1-201ENST00000441761 496 ntBASIC13.36□□□□□ -0.27
VRK1Q99986 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.36□□□□□ -0.27
VRK1Q99986 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.36□□□□□ -0.27
VRK1Q99986 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.36□□□□□ -0.27
VRK1Q99986 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.36□□□□□ -0.27
VRK1Q99986 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 AL162274.1-201ENST00000617191 1098 ntBASIC13.36□□□□□ -0.27
VRK1Q99986 AC006504.5-208ENST00000588784 2401 ntBASIC13.36□□□□□ -0.27
VRK1Q99986 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VRK1Q99986 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.36□□□□□ -0.27
VRK1Q99986 AC107918.4-201ENST00000641966 3141 ntBASIC13.36□□□□□ -0.27
VRK1Q99986 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VRK1Q99986 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms