Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AC007389.4-201ENST00000454674 793 ntBASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AC025279.2-201ENST00000569730 653 ntBASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 GNRHR2-203ENST00000581100 1187 ntBASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AC015936.2-201ENST00000593177 259 ntBASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 AC011840.2-201ENST00000563063 1520 ntBASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
PDLIM5Q96HC4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 AC027601.5-201ENST00000624065 2482 ntBASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 AC139749.1-202ENST00000617529 3139 ntBASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 AC090505.1-201ENST00000430515 1834 ntBASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 RN7SL837P-201ENST00000463010 287 ntBASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 RN7SL752P-201ENST00000463779 287 ntBASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 AC103988.2-201ENST00000561804 725 ntBASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 FKBP4P6-201ENST00000457486 1332 ntBASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.6□□□□□ -0.07
PDLIM5Q96HC4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PDLIM5Q96HC4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms